T 67 dpi by a recovery phenotype associated with a high quantity of repressed transcripts,

T 67 dpi by a recovery phenotype associated with a high quantity of repressed transcripts, thus creating an unfavourable cellular environment to support SACMV infection. Even though cassava resistance genes CMD1 and CMD2 have been situated on linkage maps of cassava, these genes have not but been identified and mapped to any scaffolds of version four.1 in the cassava draft genome presently accessible by means of phytozome, and as a result the potential function of those two genes in CMD resistance remains to be elucidated. In summary, the remarkable lack of R gene response in the MC4R Antagonist Species tolerant TME3 landrace at 12 dpi, in comparison with the very susceptible T200 whereAllie et al. BMC PKCβ Activator web Genomics 2014, 15:1006 biomedcentral/1471-2164/15/Page 14 ofTable two Selected differentially expressed (log2-fold) genes in T200 and TME3 utilised for additional discussion within this paperGene Cassava accession Arabidopsis AGI accession 12 dpi Log2 fold T200 – Class I resistance genes Disease resistance protein (TIR-NBS-LRR class) family members Illness resistance protein (TIR-NBS-LRR class) family members Disease resistance protein (TIR-NBS-LRR class) Disease resistance protein (TIR-NBS-LRR class) loved ones Disease resistance protein (TIR-NBS-LRR class) household Illness resistance protein (TIR-NBS-LRR class), putative Illness resistance protein (TIR-NBS-LRR class) household Illness resistance protein (TIR-NBS-LRR class) Disease resistance protein (TIR-NBS-LRR class), putative Disease resistance protein (TIR-NBS-LRR class) family members Illness resistance protein (TIR-NBS-LRR class) household cassava4.1_009831m.g cassava4.1_025981m.g cassava4.1_006736m.g cassava4.1_000944m.g cassava4.1_000534m.g cassava4.1_000331m.g cassava4.1_001210m.g cassava4.1_007699m.g cassava4.1_031642m.g cassava4.1_032672m.g cassava4.1_017691m.g AT5G18350.1 AT4G16960.1 AT1G69550.1 AT4G12010.1 AT5G36930.2 AT5G17680.1 AT3G44480.1 AT1G69550.1 AT5G17680.1 AT4G12010.1 AT3G04220.1 -1.98336 -1.93152 -2.74964 -3.93415 -2.40348 -2.04993 -1.80402 -3.89602 -3.68973 -2.75917 -2.28131 -3.96304 4.62E-04 2.18E-06 1.58E-03 1.14E-02 1.48E-02 two.04E-05 eight.52E-06 eight.32E-04 three.04E-03 1.78E-06 -3.16827 -4.51391 -3.38156 -2.16756 -2.20612 -3.88410 -3.83451 -3.88542 -3.47964 -4.09620 1.44E-04 2.55E-07 3.74E-05 1.24E-02 4.30E-03 two.74E-05 five.23E-06 1.83E-05 two.50E-05 three.13E-06 p-value 32 dpi Log2 fold p-value 67 dpi Log2 fold p-valueTME3 – Class I Resistance Genes Illness resistance protein (TIR-NBS-LRR class), putative Disease resistance protein (TIR-NBS-LRR class) family T200 – Histone-related genes Histone H4 Histone H2A 8 Histone superfamily protein Histone superfamily protein Histone superfamily protein Histone H2A ten Histone superfamily protein Histone superfamily protein Histone H2A 7 Histone H2A 7 Histone H4 Histone superfamily protein Histone H4 Histone H4 TME3 – Histone-related genes Histone acetyltransferase in the MYST family cassava4.1_029570m.g AT5G64610.1 -3.17558 0.03731 cassava4.1_029975m.g cassava4.1_018866m.g cassava4.1_019888m.g cassava4.1_018611m.g cassava4.1_028744m.g cassava4.1_026667m.g cassava4.1_030637m.g cassava4.1_024615m.g cassava4.1_018569m.g cassava4.1_018568m.g cassava4.1_019914m.g cassava4.1_018874m.g cassava4.1_019911m.g cassava4.1_019891m.g AT2G28740.1 AT2G38810.two AT1G07820.1 AT1G08880.1 AT3G27360.1 AT1G51060.1 AT3G27360.1 AT3G27360.1 AT5G27670.1 AT5G27670.1 AT2G28740.1 AT3G27360.1 AT2G28740.1 AT2G28740.1 two.92352 two.28609 1.74066 ?0.03976 0.04821 0.04304 1.74066 3.68140 two.48875 two.03029 2.33165 1.92352 1.86E-02 five.09E-03 five.18E-03 9.65E-03 1.04E-02 4.